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        <title>Infectious Agents and Cancer - Most accessed articles</title>
        <link>http://www.infectagentscancer.com</link>
        <description>The most accessed research articles published by Infectious Agents and Cancer</description>
        <dc:date>2012-01-30T00:00:00Z</dc:date>
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        <item rdf:about="http://www.infectagentscancer.com/content/7/1/2">
        <title>Hepatitis C virus to hepatocellular carcinoma</title>
        <description>Hepatitis C virus causes acute and chronic hepatitis and can lead to permanent liver damage and hepatocellular carcinoma  (HCC) in a significant number of patients via oxidative stress, insulin resistance (IR), fibrosis, liver cirrhosis and HCV induced steatosis. HCV induced steatosis and oxidative stress causes steato-hepatitis and these pathways lead to liver injury or HCC in chronic HCV infection. Steatosis and oxidative stress crosstalk play an important role in liver damage in HCV infection. This Review illustrates viral and host factors which induce Oxidative stress, steatosis and leads toward HCC. It also expresses Molecular cascade which leads oxidative stress and steatosis to HCC.</description>
        <link>http://www.infectagentscancer.com/content/7/1/2</link>
                <dc:creator>Shah Jahan</dc:creator>
                <dc:creator>Usman Ashfaq</dc:creator>
                <dc:creator>Muhammad Qasim</dc:creator>
                <dc:creator>Saba Khaliq</dc:creator>
                <dc:creator>Muhammad Javed Saleem</dc:creator>
                <dc:creator>Nadeem Afzal</dc:creator>
                <dc:source>Infectious Agents and Cancer 2012, null:2</dc:source>
        <dc:date>2012-01-30T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-7-2</dc:identifier>
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        <item rdf:about="http://www.infectagentscancer.com/content/7/1/1">
        <title>mTOR Inhibitors: A Novel Class of Anti Cancer Agents</title>
        <description>N/A</description>
        <link>http://www.infectagentscancer.com/content/7/1/1</link>
                <dc:creator>Haris Riaz</dc:creator>
                <dc:creator>Talha Riaz</dc:creator>
                <dc:creator>Syed Hussain</dc:creator>
                <dc:source>Infectious Agents and Cancer 2012, null:1</dc:source>
        <dc:date>2012-01-03T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-7-1</dc:identifier>
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        <item rdf:about="http://www.infectagentscancer.com/content/6/1/20">
        <title>Distribution of HPV genotypes in cervical intraepithelial lesions and cervical cancer in Tanzanian women</title>
        <description>Background:
Infection with human papillomavirus (HPV) is associated with uterine cervical intraepithelial neoplasia (CIN) and invasive cancers (ICC). Approximately 80% of ICC cases are diagnosed in under-developed countries. Vaccine development relies on knowledge of HPV genotypes characteristic of LSIL, HSIL and cancer; however, these genotypes remain poorly characterized in many African countries. To contribute to the characterization of HPV genotypes in Northeastern Tanzania, we recruited 215 women from the Reproductive Health Clinic at Kilimanjaro Christian Medical Centre. Cervical scrapes and biopsies were obtained for cytology and HPV DNA detection.
Results:
79 out of 215 (36.7%) enrolled participants tested positive for HPV DNA, with a large proportion being multiple infections (74%). The prevalence of HPV infection increased with lesion grade (14% in controls, 67% in CIN1 cases and 88% in CIN2-3). Among ICC cases, 89% had detectable HPV. Overall, 31 HPV genotypes were detected; the three most common HPV genotypes among ICC were HPV16, 35 and 45. In addition to these genotypes, co-infection with HPV18, 31, 33, 52, 58, 68 and 82 was found in 91% of ICC. Among women with CIN2-3, HPV53, 58 and 84/83 were the most common. HPV35, 45, 53/58/59 were the most common among CIN1 cases.
Conclusions:
In women with no evidence of cytological abnormalities, the most prevalent genotypes were HPV58 with HPV16, 35, 52, 66 and 73 occurring equally. Although numerical constraints limit inference, findings that 91% of ICC harbor only a small number of HPV genotypes suggests that prevention efforts including vaccine development or adjuvant screening should focus on these genotypes.</description>
        <link>http://www.infectagentscancer.com/content/6/1/20</link>
                <dc:creator>Adriana Vidal</dc:creator>
                <dc:creator>Susan Murphy</dc:creator>
                <dc:creator>Brenda Hernandez</dc:creator>
                <dc:creator>Brandi Vasquez</dc:creator>
                <dc:creator>John Bartlett</dc:creator>
                <dc:creator>Olola Oneko</dc:creator>
                <dc:creator>Pendo Mlay</dc:creator>
                <dc:creator>Joseph Orube</dc:creator>
                <dc:creator>Francine Overcash</dc:creator>
                <dc:creator>Jennifer Smith</dc:creator>
                <dc:creator>Mike van der Kolk</dc:creator>
                <dc:creator>Cathrine Hoyo</dc:creator>
                <dc:source>Infectious Agents and Cancer 2011, null:20</dc:source>
        <dc:date>2011-11-14T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-6-20</dc:identifier>
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        <prism:startingPage>20</prism:startingPage>
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        <item rdf:about="http://www.infectagentscancer.com/content/2/1/12">
        <title>Prevalence of cervical neoplastic lesions and Human Papilloma Virus infection in Egypt: National Cervical Cancer Screening Project</title>
        <description>Background:
Data from Egyptian studies provide widely varying estimates on the prevalence of pre-malignant and malignant cervical abnormalities and human papilloma virus (HPVs) infection. To define the prevalence and risk factors of pre-invasive and invasive cervical cancer (cacx), a community based full-scale cross sectional, household survey including 5453 women aged between 35 and 60 years was conducted.
Methods:
The study period was between February 2000 and December 2002. Initially, conventional Papanicolaou (Pap) smears were evaluated using the Bethesda system (TBS), followed by colposcopic guided biopsy (CGB) for all epithelial abnormalities (EA). In a third step, HPV was tested on all EA by in-situ hybridization (ISH) using first the broad spectrum HPV probe recognizing HPVs 6, 11, 16, 18, 30, 31, 35, 45, 51 and 52 followed by subtyping with probes 6/11, 16/18 and 31/33. Lastly, unequivocal cases were immunostained for herpes simplex type-2 (HSV-2), cytomegalovirus (CMV), and human immunodeficiency virus (HIV).
Results:
EA representing 7.8% (424/5453), were categorized into atypical squamous cell of undetermined significance (ASCUS) (34.4%), atypical glandular cell of undetermined significance (AGCUS) (15.3%), combined ASCUS and AGCUS (3.1%), low grade squamous intraepithelial lesions (SIL) (41.0%), high grade SIL (5.2%) and invasive lesions (1%). CGB of EA (n = 281) showed non neoplastic lesions (12.8%), atypical squamous metaplasia (ASM) (19.2%), cervical intraepithelial neoplasia I (CIN) (44.4%), CIN II (4.4%), CINIII (2.8%), endocervical lesions (5.2%), combined squamous and endocervical lesions (10.0%), invasive squamous cell carcinoma (SCC) (0.02%) and extranodal marginal zone B cell lymphoma (MZBCL) (0.02%). The overall predictive value of cytology was 87% while the predictive value for high grade lesions was 80%. On histological basis, HPVs were present in 94.3% of squamous lesions while it was difficult to be identified in endocervical ones. ISH revealed positivity for pan HPV in 65.9% of the studied biopsies (n = 217), with incorporation of the viral genome HPV 6/11, 16/18 and 31/33 in 11.1%, 33.3% and 17.1% respectively. Multiple HPVs infections were identified in 0.02%.
Conclusion:
Pre-invasive high grade lesions and invasive cervical carcinoma represent 0.5% and 0.04% respectively in Egyptian women. HPV mostly 16/18 as a risk factor (p &lt; 0.001), was frequently associated with mixed infections (p &lt; 0.001) and bilharzial infestation (p &lt; 0.001).</description>
        <link>http://www.infectagentscancer.com/content/2/1/12</link>
                <dc:creator>Howayda Abd El All</dc:creator>
                <dc:creator>Amany Refaat</dc:creator>
                <dc:creator>Khadiga Dandash</dc:creator>
                <dc:source>Infectious Agents and Cancer 2007, null:12</dc:source>
        <dc:date>2007-07-04T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-2-12</dc:identifier>
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        <prism:startingPage>12</prism:startingPage>
        <prism:publicationDate>2007-07-04T00:00:00Z</prism:publicationDate>
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        <item rdf:about="http://www.infectagentscancer.com/content/2/1/11">
        <title>Routine human papillomavirus genotyping by DNA sequencing in community hospital laboratories</title>
        <description>Background:
Human papillomavirus (HPV) genotyping is important for following up patients with persistent HPV infection and for evaluation of prevention strategy for the individual patients to be immunized with type-specific HPV vaccines. The aim of this study was to optimize a robust &quot;low-temperature&quot; (LoTemp&#8482;) PCR system to streamline the research protocols for HPV DNA nested PCR-amplification followed by genotyping with direct DNA sequencing. The protocol optimization facilitates transferring this molecular technology into clinical laboratory practice. In particular, lowering the temperature by 10&#176;C at each step of thermocycling during in vitro DNA amplification yields more homogeneous PCR products. With this protocol, template purification before enzymatic cycle primer extensions is no longer necessary.
Results:
The HPV genomic DNA extracted from liquid-based alcohol-preserved cervicovaginal cells was first amplified by the consensus MY09/MY11 primer pair followed by nested PCR with GP5+/GP6+ primers. The 150 bp nested PCR products were subjected to direct DNA sequencing. The hypervariable 34&#8211;50 bp DNA sequence downstream of the GP5+ primer site was compared to the known HPV DNA sequences stored in the GenBank using on-line BLAST for genotyping. The LoTemp&#8482; ready-to-use PCR polymerase reagents proved to be stable at room temperature for at least 6 weeks. Nested PCR detected 107 isolates of HPV in 513 cervicovaginal clinical samples, all validated by DNA sequencing. HPV-16 was the most prevalent genotype constituting 29 of 107 positive cases (27.2%), followed by HPV-56 (8.5%). For comparison, Digene HC2 test detected 62.6% of the 107 HPV isolates and returned 11 (37.9%) of the 29 HPV-16 positive cases as &quot;positive for high-risk HPV&quot;.
Conclusion:
The LoTemp&#8482; ready-to-use PCR polymerase system which allows thermocycling at 85&#176;C for denaturing, 40&#176;C for annealing and 65&#176;C for primer extension can be adapted for target HPV DNA amplification by nested PCR and for preparation of clinical materials for genotyping by direct DNA sequencing. HPV genotyping is performed by on-line BLAST algorithm of a hypervariable L1 region. The DNA sequence is included in each report to the physician for comparison in following up patients with persistent HPV infection, a recognized tumor promoter in cancer induction.</description>
        <link>http://www.infectagentscancer.com/content/2/1/11</link>
                <dc:creator>Sin Hang Lee</dc:creator>
                <dc:creator>Veronica Vigliotti</dc:creator>
                <dc:creator>Jessica Vigliotti</dc:creator>
                <dc:creator>Suri Pappu</dc:creator>
                <dc:source>Infectious Agents and Cancer 2007, null:11</dc:source>
        <dc:date>2007-06-05T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-2-11</dc:identifier>
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                <prism:publicationName>Infectious Agents and Cancer</prism:publicationName>
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        <prism:startingPage>11</prism:startingPage>
        <prism:publicationDate>2007-06-05T00:00:00Z</prism:publicationDate>
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                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.infectagentscancer.com/content/6/1/11">
        <title>Epidemiology of HPV genotypes in Uganda and the role of the current preventive vaccines: A systematic review</title>
        <description>Background:
Limited data are available on the distribution of human papillomavirus (HPV) genotypes in the general population and in invasive cervical cancer (ICC) in Uganda. Yet, with the advent of preventive HPV vaccines that target HPV 16 and 18 responsible for causing about 70% of ICC cases in the world, such information is crucial to predict how vaccination and HPV-based screening will influence prevention of ICC.
Methods:
To review the distribution of HPV infection and prevalent genotypes, electronic databases (e.g. PubMed/MEDLINE and HINARI) were searched for peer reviewed English articles on HPV infection up to November 30, 2010. Eligible studies were selected according to the following criteria: DNA-confirmed cervical or male genital HPV prevalence and genotypes, HPV incidence estimates and HPV seroprevalence among participants.
Results:
Twenty studies were included in the review. Among HIV negative adult women, the prevalence of HR-HPV infections ranged from 10.2% -40.0% compared to 37.0% -100.0% among HIV positive women. Among HIV positive young women aged below 25 years, the prevalence of HR-HPV genotypes ranged from 41.6% -75.0% compared to 23.7% -67.1% among HIV negative women. Multiple infections with non vaccine HR-HPV genotypes were frequent in both HIV positive and HIV negative women. The main risk factors for prevalent HPV infections were age, lifetime number of sexual partners and HIV infection. Incident infections with HR-HPV genotypes were more frequent among adult HIV positive than HIV negative women estimated at 17.3 and 7.0 per 100 person-years, respectively. Similarly, incident HR-HPV among young women aged below 25 years were more frequent among HIV positive (40.0 per 100 person-years) than HIV negative women (20.3 per 100 person-years) women. The main risk factor for incident infection was HIV infection. HPV 16 and 18 were the most common genotypes in ICC with HPV 16/18 contributing up to 73.5% of cases with single infections.Among uncircumcised adult HIV positive males, HR-HPV prevalence ranged from 55.3% -76.6% compared to 38.6% -47.6% in HIV negative males. Incident and multiple HR-HPV infections were frequent in HIV positive males. Being uncircumcised was the main risk factor for both prevalent and incident HPV infection.
Conclusion:
Infections with HR-HPV genotypes were very common particularly among HIV positive individuals and young women irrespective of HIV status. Given the high prevalence of HIV infection, HPV-associated conditions represent a major public health burden in Uganda. However, although the most common HPV genotypes in ICC cases in Uganda were those targeted by current preventive vaccines, there were a large number of individuals infected with other HR-HPV genotypes. Technology allowing, these other HR-HPV types should be considered in the development of the next generation of vaccines.</description>
        <link>http://www.infectagentscancer.com/content/6/1/11</link>
                <dc:creator>Cecily Banura</dc:creator>
                <dc:creator>Florence Mirembe</dc:creator>
                <dc:creator>Anne Katahoire</dc:creator>
                <dc:creator>Proscovia Namujju</dc:creator>
                <dc:creator>Anthony Mbonye</dc:creator>
                <dc:creator>Fred Mangen</dc:creator>
                <dc:source>Infectious Agents and Cancer 2011, null:11</dc:source>
        <dc:date>2011-07-12T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-6-11</dc:identifier>
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                <prism:publicationName>Infectious Agents and Cancer</prism:publicationName>
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        <prism:startingPage>11</prism:startingPage>
        <prism:publicationDate>2011-07-12T00:00:00Z</prism:publicationDate>
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                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
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        <item rdf:about="http://www.infectagentscancer.com/content/2/1/13">
        <title>Simian Virus 40 in humans</title>
        <description>Simian virus 40 (SV40) is a monkey virus that was administered to human populations by contaminated vaccines which were produced in SV40 naturally infected monkey cells.Recent molecular biology and epidemiological studies suggest that SV40 may be contagiously transmitted in humans by horizontal infection, independently from the earlier administration of SV40-contaminated vaccines.SV40 footprints in humans have been found associated at high prevalence with specific tumor types such as brain and bone tumors, mesotheliomas and lymphomas and with kidney diseases, and at lower prevalence in blood samples from healthy donors.Contrasting reports appeared in the literature on the circulation of SV40 in humans by contagious transmission and its association, as a possible etiologic cofactor, with specific human tumors. As a consequence of the conflicting results, a considerable debate has developed in the scientific community. In the present review we consider the main results obtained by different groups investigating SV40 sequences in human tumors and in blood specimens, the putative role of SV40 in the onset/progression of specific human tumors, and comment on the hypotheses arising from these data.</description>
        <link>http://www.infectagentscancer.com/content/2/1/13</link>
                <dc:creator>Fernanda Martini</dc:creator>
                <dc:creator>Alfredo Corallini</dc:creator>
                <dc:creator>Veronica Balatti</dc:creator>
                <dc:creator>Silvia Sabbioni</dc:creator>
                <dc:creator>Cecilia Pancaldi</dc:creator>
                <dc:creator>Mauro Tognon</dc:creator>
                <dc:source>Infectious Agents and Cancer 2007, null:13</dc:source>
        <dc:date>2007-07-09T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-2-13</dc:identifier>
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                <prism:publicationName>Infectious Agents and Cancer</prism:publicationName>
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        <prism:startingPage>13</prism:startingPage>
        <prism:publicationDate>2007-07-09T00:00:00Z</prism:publicationDate>
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                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
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        <item rdf:about="http://www.infectagentscancer.com/content/6/1/9">
        <title>Human papillomavirus serologic follow-up response and relationship to survival in head and neck cancer: a case-comparison study
</title>
        <description>Background:
Human papillomavirus high risk (HPV-HR) type 16 is a significant risk factor for head and neck cancers (HNC) independent of tobacco and alcohol. The purpose of this study was to determine whether antibody levels to the HPV-16 oncoproteins E6 and E7 measured in sera collected at baseline (BL) prior to treatment and at two post-treatment follow-up (FU) visits were associated with HNC risk factors or prognosis.
Methods:
Presence of antibodies to HPV-16 E6 and E7 was evaluated in 109 newly diagnosed HNC cases with BL and FU blood samples, using the enzyme-linked immunosorbent assay (ELISA).
Results:
HPV-16 E6 and/or E7 seropositive HNC cases were associated with higher risk in younger patients (&#8804; 55 years), more sexual partners (&#8805; 10), oropharyngeal cancer, worse stage at diagnosis, poorer grade, and nodal involvement. Between BL and FU (median = 8.3 months), there were decreased antibody levels for seropositive E6 (73% vs. 27%, p = 0.02) and seropositive E7 patients (65% vs. 35%, p = 0.09) with 5% of BL E6 and 35% of BL E7 seropositive patients converting to negative status at FU. Overall mortality (OM) was significantly worse among BL E6 seronegative patients than among BL seropositive patients (40.2% vs.13.6%, p = 0.01). There were no disease specific (DS) deaths among BL E6 seropositive vs. 24% in BL E6 seronegative patients (p = 0.01). BL E7 seronegative patients also had higher mortality than BL seropositive patients (OM: 38.2% vs. 20.0%, p = 0.04; DS: 22.5% vs. 5.6%, p = 0.07).
Conclusion:
These findings are the first to follow post-treatment OD levels of HPV-16 E6 and E7 in HNC and suggest that these HPV antibodies may be potential prognostic markers of survival in HNC patients.</description>
        <link>http://www.infectagentscancer.com/content/6/1/9</link>
                <dc:creator>Linda Rubenstein</dc:creator>
                <dc:creator>Elaine Smith</dc:creator>
                <dc:creator>Michael Pawlita</dc:creator>
                <dc:creator>Thomas Haugen</dc:creator>
                <dc:creator>Eva Hamsikova</dc:creator>
                <dc:creator>Lubomir Turek</dc:creator>
                <dc:source>Infectious Agents and Cancer 2011, null:9</dc:source>
        <dc:date>2011-07-08T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1750-9378-6-9</dc:identifier>
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        <prism:startingPage>9</prism:startingPage>
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        <item rdf:about="http://www.infectagentscancer.com/content/6/1/4">
        <title>The role of Human Papillomavirus in the pathogenesis of Head &amp; Neck Squamous Cell Carcinoma: an overview</title>
        <description>Cancer statistics report an increased incidence of OSCC and OPSCC around the world. Though improvements in screening and early diagnosis have dramatically reduced the incidence of this neoplasm in recent years, the 5-year-disease-free survival, is still poor, specially for oropharyngeal cancer, despite the great scientific and financial efforts. Recently, several papers showed that HPV may be involved at least in the pathogenesis of a subgroup of oral and cervical SCC, leading to distinct molecular characteristics compared with HPV-negative ones. Nevertheless, OPSCCs associated with HPV infection seem to show a better prognosis and affect younger patients (&lt; 40 yrs.), especially females. Therefore, there is the need to properly assess oropharyngeal SCC subgroups: 1) not HPV associated/classic oral SCC: less responsive to anticancer drugs: needs novel post-surgical treatment; 2) HPV associated/oral SCC: needs several management options and suitable &quot;target&quot; therapy against the virus, and/or immune-stimulating therapy. Further issues are: 1) the disclosure of putative targets for more efficient molecular therapy, which may work as cervical cancer post-surgical treatment, in anticipation of the effects of &quot;global prevention&quot; performed by WHO anti-HPV vaccination programs; 2) careful identification of precancerous lesions in both sites; dysplasia is currently treated by excisional or ablative procedures, which don&apos;t consider the concept of field carcinogenesis. In fact, it is probable that near or far from an excised precancerous lesion new foci of cell transformation may exist, which are not yet macroscopically evident, but, if detected, would put the patient into a high risk subgroup.Comparing findings reported in the recent literature, the data of this state of the art about HPV might add useful informations concerning oropharyngeal carcinogenesis. Moreover, our review would be useful in order to define novel perspectives of treatment choice for Head &amp; Neck cancer patients, by combining well known chemotherapeutical drugs with new molecular &quot;target&quot; therapy.</description>
        <link>http://www.infectagentscancer.com/content/6/1/4</link>
                <dc:creator>Giuseppe Pannone</dc:creator>
                <dc:creator>Angela Santoro</dc:creator>
                <dc:creator>Silvana Papagerakis</dc:creator>
                <dc:creator>Lorenzo Lo Muzio</dc:creator>
                <dc:creator>Gaetano De Rosa</dc:creator>
                <dc:creator>Pantaleo Bufo</dc:creator>
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